Annotated Mplus Output
Exploratory Factor Analysis

This page was created using Mplus version 5.2, the output and/or syntax may be different for other versions of Mplus.

This page shows an example exploratory factor analysis with footnotes explaining the output. The data used in this example were collected on 1428 college students (complete data on 1365 observations) and are responses to items on a survey. You can obtain the data set by clicking here. The analysis includes 12 variables, item13 to item24.

Data:
  File is m255.dat ;
Variable:
  Names are 
     item13 item14 item15 item16 item17 item18 item19 item20 item21 item22
     item23 item24;
  Missing are all (-9999) ; 
Analysis: 
    type = efa 3 3;

Comments on syntax


Notes and summary information

The information below printed near the top of the output, it is useful because it lets you know what Mplus did.  You want to check this part of the output to make sure Mplus ran the analysis that you intended.

*** WARNINGa
  Data set contains cases with missing on all variables.
  These cases were not included in the analysis.
  Number of cases with missing on all variables:  1
   1 WARNING(S) FOUND IN THE INPUT INSTRUCTIONS

SUMMARY OF ANALYSIS

Number of groups                                                 1
Number of observationsb                                       1427

Number of dependent variablec                                   12
Number of independent variables                                  0
Number of continuous latent variables                            0

Observed dependent variablesd

  Continuous
   ITEM13      ITEM14      ITEM15      ITEM16      ITEM17      ITEM18
   ITEM19      ITEM20      ITEM21      ITEM22      ITEM23      ITEM24


Estimatore                                                      ML
Rotationf                                                   GEOMIN
Row standardization                                    CORRELATION
Type of rotationg                                          OBLIQUE
Epsilon value                                               Varies
Information matrix                                        OBSERVED
Maximum number of iterations                                  1000
Convergence criterion                                    0.500D-04
Maximum number of steepest descent iterations                   20
Maximum number of iterations for H1                           2000
Convergence criterion for H1                             0.100D-03
Optimization Specifications for the Exploratory Factor Analysis
Rotation Algorithm
  Number of random starts                                       30
  Maximum number of iterations                               10000
  Derivative convergence criterion                       0.100D-04

Input data file(s)
  m255.dat

Input data format  FREE

a. Warning. In this case, the output includes a warning that 1 case had missing values on all of the variables in the analysis, and hence was excluded from the model.

b. Number of observations. The number of observations used in the analysis. As mentioned above, by default, Mplus will include all cases that have at least partial data on the variables in the analysis.

c. Number of dependent variables. Gives the number of dependent (outcome) variables in the model. Note that Mplus classifies the factor indicators as dependent variables.

d. Observed dependent variables. The list of variables included in this analysis. All of the variables in our model are listed under Continuous. If the model included categorical variables, they would be listed here under the heading Categorical. If this section includes variables you did not intend to include in your analysis, you may need to use the usevariables option of the data command.

e. Estimator. The method used to estimate the model, in this case, maximum likelihood (ML).

f. Rotation. The specific rotation method used in the model.

g. Type of rotation. Rotations that allow the factors to be correlated are oblique, while rotations that force the factors to be uncorrelated are known as orthogonal. The default geomin rotation is oblique.

SUMMARY OF DATA

     Number of missing data patternsh            24


COVARIANCE COVERAGE OF DATA

Minimum covariance coverage value   0.100


     PROPORTION OF DATA PRESENT


           Covariance Coveragei
              ITEM13        ITEM14        ITEM15        ITEM16        ITEM17
              ________      ________      ________      ________      ________
 ITEM13         0.994
 ITEM14         0.994         0.998
 ITEM15         0.993         0.996         0.998
 ITEM16         0.991         0.994         0.994         0.995
 ITEM17         0.992         0.995         0.995         0.994         0.997
 ITEM18         0.992         0.996         0.996         0.994         0.996
 ITEM19         0.989         0.993         0.994         0.992         0.994
 ITEM20         0.974         0.977         0.977         0.975         0.976
 ITEM21         0.992         0.994         0.994         0.992         0.994
 ITEM22         0.986         0.989         0.989         0.987         0.989
 ITEM23         0.992         0.995         0.995         0.992         0.994
 ITEM24         0.989         0.992         0.992         0.989         0.991


           Covariance Coverage
              ITEM18        ITEM19        ITEM20        ITEM21        ITEM22
              ________      ________      ________      ________      ________
 ITEM18         0.998
 ITEM19         0.995         0.995
 ITEM20         0.977         0.975         0.978
 ITEM21         0.994         0.992         0.977         0.996
 ITEM22         0.989         0.987         0.973         0.989         0.991
 ITEM23         0.995         0.992         0.976         0.995         0.989
 ITEM24         0.991         0.988         0.973         0.991         0.986


           Covariance Coverage
              ITEM23        ITEM24
              ________      ________
 ITEM23         0.997
 ITEM24         0.992         0.993

h. Number of missing data patterns. This gives the number of different patterns of missingness present in the variables included in the model. Large numbers of missing data patterns can result in difficulty estimating the model.

i. Covariance Coverage. If any of the variables in the model have missing values, Mplus provides information on the number and distribution of missing values. The covariance coverage matrix gives the proportion of values present for each variable individually (on the diagonal) and pairwise combinations of variables (below the diagonal). For example, 99.4% of cases have non-missing values for item13 and 99.3% of cases have valid values for item13 and item15.

RESULTS FOR EXPLORATORY FACTOR ANALYSIS


           EIGENVALUES FOR SAMPLE CORRELATION MATRIXj
                  1             2             3             4             5
              ________      ________      ________      ________      ________
      1         6.289         1.228         0.709         0.606         0.561


           EIGENVALUES FOR SAMPLE CORRELATION MATRIX
                  6             7             8             9            10
              ________      ________      ________      ________      ________
      1         0.499         0.470         0.384         0.366         0.329


           EIGENVALUES FOR SAMPLE CORRELATION MATRIX
                 11            12
              ________      ________
      1         0.309         0.251
      
      EXPLORATORY FACTOR ANALYSIS WITH 3 FACTOR(S):


TESTS OF MODEL FIT

Chi-Square Test of Model Fitk

          Value                            137.865
          Degrees of Freedom                    33
          P-Value                           0.0000

Chi-Square Test of Model Fit for the Baseline Model

          Value                           9132.568
          Degrees of Freedom                    66
          P-Value                           0.0000

CFI/TLIl

          CFI                                0.988
          TLI                                0.977

Loglikelihood

          H0 Value                      -17776.793
          H1 Value                      -17707.861

Information Criteriam

          Number of Free Parameters             57
          Akaike (AIC)                   35667.586
          Bayesian (BIC)                 35967.596
          Sample-Size Adjusted BIC       35786.527
            (n* = (n + 2) / 24)

RMSEA (Root Mean Square Error Of Approximation)n

          Estimate                           0.047
          90 Percent C.I.                    0.039  0.055
          Probability RMSEA <= .05           0.701

SRMR (Standardized Root Mean Square Residual)

          Value                              0.014



MINIMUM ROTATION FUNCTION VALUE       0.31440

j. Eigenvalues for sample correlation matrix. An eigenvalue is the variance of the factor. In the initial factor solution, the first factor will account for the most variance, the second will account for the next highest amount of variance, and so on.

k. Chi-square test of model fit. Compares the fit of the model to a model with no restrictions (i.e. all variables correlated freely). Chi-square values can be used to test the difference in fit between nested models.

l. Fit indices. The Comparative Fit Index (CFI) and the Tucker Lewis Index (TLI) are measures of model fit. They have a range from 0 to 1 with higher values indicating better fit.

m. Information Criteria. The Akaike information criterion (AIC) and the Bayesian information criterion (BIC, sometimes also called the Schwarz criterion), can also be used to compare models, including non-nested models.

n. RMSEA. The root mean square error of approximation is another measure of model fit. Smaller values indicate better model fit.

           GEOMIN ROTATED LOADINGSo
                  1             2             3
              ________      ________      ________
 ITEM13         0.858        -0.087         0.010
 ITEM14         0.832        -0.022        -0.021
 ITEM15         0.724         0.085         0.007
 ITEM16         0.645         0.129        -0.069
 ITEM17         0.515         0.276         0.084
 ITEM18         0.091         0.755         0.012
 ITEM19        -0.015         0.842        -0.095
 ITEM20         0.099         0.559        -0.011
 ITEM21         0.221         0.408         0.199
 ITEM22         0.000         0.508         0.205
 ITEM23         0.123         0.011         0.795
 ITEM24        -0.009        -0.008         0.804
 
           GEOMIN FACTOR CORRELATIONSp
                  1             2             3
              ________      ________      ________
      1         1.000
      2         0.591         1.000
      3         0.743         0.704         1.000

o. Geomin rotated loadings.  The rotated loadings are the linear combination of variables that make up the factor. In addition to the factor loadings, to completely interpret an oblique rotation one needs to take into account both the factor pattern and the factor structure matrices (shown bellow) and the correlations among the factors. Note that orthogonal rotations produce only a single matrix, which gives the correlations between the variable and the factor.

p. Geomin factor correlations. The factor correlations matrix gives the correlations between the factors. For example, the correlation between factor 1 and factor 2 is 0.591.

           ESTIMATED RESIDUAL VARIANCESq
              ITEM13        ITEM14        ITEM15        ITEM16        ITEM17
              ________      ________      ________      ________      ________
      1         0.332         0.354         0.388         0.543         0.388


           ESTIMATED RESIDUAL VARIANCES
              ITEM18        ITEM19        ITEM20        ITEM21        ITEM22
              ________      ________      ________      ________      ________
      1         0.325         0.408         0.623         0.459         0.555


           ESTIMATED RESIDUAL VARIANCES
              ITEM23        ITEM24
              ________      ________
      1         0.194         0.373

q. Estimated residual variances. These are the variances of the observed variables after accounting for all of the variance in the efa model.

Below are the standard errors for the geomin rotated loadings, factor correlations, and estimated residual variances. These values can be used to perform hypothesis tests and estimate confidence intervals.

           S.E. GEOMIN ROTATED LOADINGS
                  1             2             3
              ________      ________      ________
 ITEM13         0.043         0.051         0.031
 ITEM14         0.030         0.035         0.040
 ITEM15         0.040         0.053         0.039
 ITEM16         0.073         0.060         0.099
 ITEM17         0.044         0.052         0.061
 ITEM18         0.043         0.033         0.029
 ITEM19         0.027         0.044         0.059
 ITEM20         0.045         0.039         0.040
 ITEM21         0.045         0.044         0.051
 ITEM22         0.022         0.048         0.057
 ITEM23         0.152         0.034         0.180
 ITEM24         0.024         0.090         0.104


           S.E. GEOMIN FACTOR CORRELATIONS
                  1             2             3
              ________      ________      ________
      1         0.000
      2         0.042         0.000
      3         0.054         0.030         0.000


           S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM13        ITEM14        ITEM15        ITEM16        ITEM17
              ________      ________      ________      ________      ________
      1         0.021         0.021         0.020         0.025         0.018


           S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM18        ITEM19        ITEM20        ITEM21        ITEM22
              ________      ________      ________      ________      ________
      1         0.021         0.026         0.024         0.020         0.023


           S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM23        ITEM24
              ________      ________
      1         0.074         0.076

Below are the z-statistics (i.e. estimate/standard error) for the geomin rotated loadings, factor correlations, and estimated residual variances. These values can be compared to a normal distribution to perform hypothesis tests.

           Est./S.E. GEOMIN ROTATED LOADINGS
                  1             2             3
              ________      ________      ________
 ITEM13        20.050        -1.681         0.317
 ITEM14        27.757        -0.623        -0.516
 ITEM15        18.307         1.618         0.165
 ITEM16         8.793         2.157        -0.700
 ITEM17        11.680         5.280         1.377
 ITEM18         2.136        23.045         0.416
 ITEM19        -0.564        19.088        -1.602
 ITEM20         2.190        14.343        -0.280
 ITEM21         4.966         9.225         3.884
 ITEM22        -0.017        10.650         3.567
 ITEM23         0.812         0.314         4.426
 ITEM24        -0.357        -0.088         7.694


           Est./S.E. GEOMIN FACTOR CORRELATIONS
                  1             2             3
              ________      ________      ________
      1         0.000
      2        14.212         0.000
      3        13.724        23.775         0.000


           Est./S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM13        ITEM14        ITEM15        ITEM16        ITEM17
              ________      ________      ________      ________      ________
      1        16.029        16.792        19.200        21.564        21.324


           Est./S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM18        ITEM19        ITEM20        ITEM21        ITEM22
              ________      ________      ________      ________      ________
      1        15.574        15.812        26.444        23.392        24.618


           Est./S.E. ESTIMATED RESIDUAL VARIANCES
              ITEM23        ITEM24
              ________      ________
      1         2.610         4.894
           FACTOR STRUCTUREr
                  1             2             3
              ________      ________      ________
 ITEM13         0.815         0.428         0.587
 ITEM14         0.803         0.456         0.582
 ITEM15         0.779         0.518         0.605
 ITEM16         0.670         0.461         0.501
 ITEM17         0.740         0.639         0.660
 ITEM18         0.546         0.818         0.611
 ITEM19         0.412         0.766         0.486
 ITEM20         0.421         0.610         0.456
 ITEM21         0.610         0.678         0.650
 ITEM22         0.452         0.651         0.562
 ITEM23         0.720         0.643         0.894
 ITEM24         0.584         0.553         0.792


           FACTOR DETERMINACIESs
                  1             2             3
              ________      ________      ________
      1         0.945         0.926         0.935

r. Factor Structure. With an oblique rotation, the factor structure matrix presents the correlations between the variables and the factors. For example, the correlation between item13 and factor 1 is 0.815. As noted above, the factor structure matrix is used along with the factor loadings and factor correlations to interpret the model.

s. Factor Determinacies are the proportion of variance in each factor that is explained by the observed variables. Higher proportions of variance explained indicate better fit.

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